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AutoAssign is a constraint-based expert system for automating the analysis of backbone resonance assignments using triple resonance NMR spectra of small proteins.
The AutoAssgin web interface can submit jobs to the AutoAssign server. It can also submit jobs to PINE (PLoS Comput Biol. 2009 Mar;5(3):e1000307), another automated resonance assignment web server. The AutoAssign interface will immediately show the results from the AutoAssign server. Once the PINE results are available by e-mail, the user can also upload them into the AutoAssign web interface. The AutoAssign web interface will then show an interactive comparison chart where the user can easily find different resonance assignments between the two programs. This comparison chart can generally guide the user for further investigation of resonances assigned differently by the AutoAssign and PINE web servers. The resonances assigned by both programs generally have higher accuracy confidences.
- AutoAssign Calculations